30 Minute ISFS Data for SOAS

30 Minute ISFS Data for SOAS

These data contain surface meteorology measurements of the Integrated Surface Flux System (ISFS) during the  Southern Oxidant and Aerosol Study (SOAS), at the Alabama Aquatic Biodiversity Center (AABC), during May, June and July of 2013.

For general information about the operations of the ISFS during SOAS see https://www.eol.ucar.edu/field_projects/soas.

The ISFS 30 minute dataset contains some of the first and second moments of variables measured by the NCAR ISFS during SOAS, in addition to derived calculations of the fluxes of sensible and latent heat, friction velocity, surface heat flux and net radiation.

The data are stored in NetCDF files. Information on the NetCDF file format and software is available at http://www.unidata.ucar.edu/software/netcdf/.  Information specfic to ISFS NetCDF files is available at https://www.eol.ucar.edu/content/isfs-netcdf-files.

NetCDF File Names

Each NetCDF file contains one week of data. The file names are of the form "isfs_YYYYMMDD.nc", where YYYYMMDD is the year, month and day in UTC of the start of the data.

NetCDF Variables

See the table at the bottom of this page for a partial listing of the variables in the file.  The second moments are not listed in that table.

See the table at https://www.eol.ucar.edu/content/soas-isfs-page for information on the sensors that were deployed.

Time Representation

The base_time variable contains one value, the time of the start of the file, as a number of POSIX (non-leap) seconds since 1970 Jan 1, 00:00 UTC.

Values for each time-varying measurement will be found in the NetCDF files, as a variable with a time dimension.  The time dimension for a file containing a full week of data will be 336, the number of 30 minute periods in a week.

The time variable contains the time to be associated with each sample, in units of seconds since base_time, or 00:00 UTC of the day.  Each time value is the middle of the averaging period, and will have  values of 900 (00:15:00 UTC), 2700 (00:45:00), etc, up to 86250 (23:45:00 UTC).

Dimensions

The NetCDF dimensions in each file are:

Dimension name size description
time up to 336 number of 30 minute periods in a week
site 2 index for the ISFS sites at SOAS, the 45 meter tower and the pond site
layout 2 index to indicate one of two station layouts.

Short Name Attributes

Each measured variable will have a short_name NetCDF attribute. The field before the first period in the short_name is a generic variable name, such as T for temperature, Rsw for short wave radiation, or u for the U component of the wind. For second moments, such as variances and co-variances, the first field of the short_name will contain single quote marks after a variable to indicate it is an average of a deviation.  For example,  a leading short name of  w'tc', indicates the quantity is an average of  (w-mean(w)) * (tc-mean(tc)), where mean(x) is the 5 minute mean of the variable x, w is the vertical wind component, and tc is the temperaure from the speed of sound.

Higher Moments

For each of the  3-D sonic anemometers, the following second moments in u,v,w and tc are provided for the computation of eddy-correlation fluxes. Scalar values such as water vapor density and carbon dioxide were also measured at the same locations. kh2o is a water vapor measurement from a Campbell krypton hygrometer at 2 and 13.9 meters on the AABC tower. h2o and co2 are water vapor and carbon-dioxide measurements from LICOR 7500 gas analyzers at 8, 20, 26, 32 and 43.9 meters, and from a Campbell Scientific EC150 IRGA at 38 meters.

Second Moments
  u v w tc kh2o h2o co2
u u'u' u'v' u'w' u'tc' u'kh2o' u'h2o' u'co2'
v   v'v' v'w' v'tc' v'kh2o' v'h2o' v'co2'
w     w'w' w'tc' w'kh2o' w'h2o' w'co2'
scalar

variances
      tc'tc' kh2o'kh2o' h2o'h2o' co2'co2'

Heights

The height in meters above ground of the measurement, if appropriate, will be indicated in a second field after a period in the short_name, for example RH.26m, or u'tc'.38m.

Variable Names

The actual NetCDF variable names will have underscores, '_', in place of periods and single quotes.  Therefore a variable with a short_name attribute of w'co2'.38m will have a NetCDF variable name of w_co2__38m.

Units and Long Names

Each variable will have NetCDF attributes containing the units of the measurement, and a long name giving more information on the measurement.

Counts Attributes

Variables from sensors used in eddy-covariance flux measurements will have a counts attribute indicating the number of samples that were included in each statistic.

Missing Data

The missing data value is 1x10^37.  A missing value indicates either that nothing was measured at the location indicated in the variable name and station index, or the sensor was not reporting at the given time, or it was detemined that the data value did not meet QC criteria during post-project analysis.

Table of NetCDF Variables

The following is a partial listing of the variables in the NetCDF files. It does not contain the second moments.

 

NetCDF name ISFS short name Units Dimensions Long Name
u_2m u.2m m/s time Wind U component from CSAT3
v_2m v.2m m/s time Wind V component from CSAT3
w_2m w.2m m/s time Wind W component from CSAT3
tc_2m tc.2m degC time Virtual air temperature from speed of sound, CSAT3
kh2o_2m kh2o.2m g/m^3 time CSI Krypton water vapor
T_2m T.2m degC time Air Temperature from NCAR hygrothermometer
RH_2m RH.2m % time Relative Humidity from NCAR hygrothermometer
H_2m H.2m W/m^2 time Sensible heat flux
LE_2m LE.2m W/m^2 time Latent heat flux
rhoDry_2m rhoDry.2m kg/m^3 time Density of dry air
u__2m u*.2m m/s time Friction velocity
p_8m p.8m mb time Barometric Pressure, Paroscientific 6000
u_8m u.8m m/s time Wind U component from CSAT3
v_8m v.8m m/s time Wind V component from CSAT3
w_8m w.8m m/s time Wind W component from CSAT3
tc_8m tc.8m degC time Virtual air temperature from speed of sound, CSAT3
h2o_8m h2o.8m g/m^3 time LICOR 7500 water vapor density
co2_8m co2.8m g/m^3 time LICOR 7500 CO2 density
T_8m T.8m degC time Air Temperature from NCAR hygrothermometer
RH_8m RH.8m % time Relative Humidity from NCAR hygrothermometer
lidiag_8m lidiag.8m   time LICOR 7500 diagnostic value
H_8m H.8m W/m^2 time  
LE_8m LE.8m W/m^2 time  
rhoDry_8m rhoDry.8m kg/m^3 time  
u__8m u*.8m m/s time  
u_13_9m u.13.9m m/s time Wind U component from CSAT3
v_13_9m v.13.9m m/s time Wind V component from CSAT3
w_13_9m w.13.9m m/s time Wind W component from CSAT3
tc_13_9m tc.13.9m degC time Virtual air temperature from speed of sound, CSAT3
kh2o_13_9m kh2o.13.9m g/m^3 time CSI Krypton water vapor
T_13_9m T.13.9m degC time Air Temperature from NCAR hygrothermometer
RH_13_9m RH.13.9m % time Relative Humidity from NCAR hygrothermometer
H_13_9m H.13.9m W/m^2 time  
LE_13_9m LE.13.9m W/m^2 time  
rhoDry_13_9m rhoDry.13.9m kg/m^3 time  
u__13_9m u*.13.9m m/s time  
p_20m p.20m mb time Barometric Pressure, Paroscientific 6000
u_20m u.20m m/s time Wind U component from CSAT3
v_20m v.20m m/s time Wind V component from CSAT3
w_20m w.20m m/s time Wind W component from CSAT3
tc_20m tc.20m degC time Virtual air temperature from speed of sound, CSAT3
h2o_20m h2o.20m g/m^3 time LICOR 7500 water vapor density
co2_20m co2.20m g/m^3 time LICOR 7500 CO2 density
T_20m T.20m degC time Air Temperature from NCAR hygrothermometer
RH_20m RH.20m % time Relative Humidity from NCAR hygrothermometer
lidiag_20m lidiag.20m   time LICOR 7500 diagnostic value
H_20m H.20m W/m^2 time  
LE_20m LE.20m W/m^2 time  
rhoDry_20m rhoDry.20m kg/m^3 time  
u__20m u*.20m m/s time  
u_26m u.26m m/s time Wind U component from CSAT3
v_26m v.26m m/s time Wind V component from CSAT3
w_26m w.26m m/s time Wind W component from CSAT3
tc_26m tc.26m degC time Virtual air temperature from speed of sound, CSAT3
h2o_26m h2o.26m g/m^3 time LICOR 7500 water vapor density
co2_26m co2.26m g/m^3 time LICOR 7500 CO2 density
lidiag_26m lidiag.26m   time LICOR 7500 diagnostic value
T_26m T.26m degC time Air Temperature from NCAR hygrothermometer
RH_26m RH.26m % time Relative Humidity from NCAR hygrothermometer
H_26m H.26m W/m^2 time  
LE_26m LE.26m W/m^2 time  
rhoDry_26m rhoDry.26m kg/m^3 time  
u__26m u*.26m m/s time  
u_32m u.32m m/s time Wind U component from CSAT3
v_32m v.32m m/s time Wind V component from CSAT3
w_32m w.32m m/s time Wind W component from CSAT3
tc_32m tc.32m degC time Virtual air temperature from speed of sound, CSAT3
h2o_32m h2o.32m g/m^3 time LICOR 7500 water vapor density
co2_32m co2.32m g/m^3 time LICOR 7500 CO2 density
lidiag_32m lidiag.32m   time LICOR 7500 diagnostic value
p_32m p.32m mb time Barometric Pressure, Paroscientific 6000
T_32m T.32m degC time Air Temperature from NCAR hygrothermometer
RH_32m RH.32m % time Relative Humidity from NCAR hygrothermometer
H_32m H.32m W/m^2 time  
LE_32m LE.32m W/m^2 time  
rhoDry_32m rhoDry.32m kg/m^3 time  
u__32m u*.32m m/s time  
u_38m u.38m m/s time Wind U component from CSAT3
v_38m v.38m m/s time Wind V component from CSAT3
w_38m w.38m m/s time Wind W component from CSAT3
tc_38m tc.38m degC time Virtual air temperature from speed of sound, CSAT3
h2o_38m h2o.38m g/m^3 time Water vapor density from CSI IRGA
co2_38m co2.38m g/m^3 time CO2 density from CSI IRGA
irgadiag_38m irgadiag.38m   time CSI IRGA diagnostic
T_38m T.38m degC time Air Temperature from NCAR hygrothermometer
RH_38m RH.38m % time Relative Humidity from NCAR hygrothermometer
H_38m H.38m W/m^2 time  
LE_38m LE.38m W/m^2 time  
rhoDry_38m rhoDry.38m kg/m^3 time  
u__38m u*.38m m/s time  
Rlw_in_41m Rlw.in.41m W/m^2 time Incoming long wave radiation at 41 meters
Rlw_out_41m Rlw.out.41m W/m^2 time Outgoing long wave radiation at 41 meters
Rsw_in_41m Rsw.in.41m W/m^2 time Incoming short wave radiation at 41 meters
Rsw_out_41m Rsw.out.41m W/m^2 time Outgoing short wave radiation at 41 meters
Rsum_41m Rsum.41m W/m^2 time Sum of 4 components of radiation at 41 meters
lidiag_43_9m lidiag.43.9m   time LICOR 7500 diagnostic value
p_43_9m p.43.9m mb time Barometric Pressure, Paroscientific 6000
u_43_9m u.43.9m m/s time Wind U component from CSAT3
v_43_9m v.43.9m m/s time Wind V component from CSAT3
w_43_9m w.43.9m m/s time Wind W component from CSAT3
tc_43_9m tc.43.9m degC time Virtual air temperature from speed of sound, CSAT3
h2o_43_9m h2o.43.9m g/m^3 time LICOR 7500 water vapor density
co2_43_9m co2.43.9m g/m^3 time LICOR 7500 CO2 density
T_43_9m T.43.9m degC time Air Temperature from NCAR hygrothermometer
RH_43_9m RH.43.9m % time Relative Humidity from NCAR hygrothermometer
H_43_9m H.43.9m W/m^2 time  
LE_43_9m LE.43.9m W/m^2 time  
rhoDry_43_9m rhoDry.43.9m kg/m^3 time  
u__43_9m u*.43.9m m/s time  
Rlw_in Rlw.in W/m^2 time Incoming long wave radiation at forest floor
Rlw_out Rlw.out W/m^2 time Outgoing long wave radiation at forest floor
Rsw_dfs_spn1 Rsw.dfs.spn1 W/m^2 time Diffuse short wave radiation at forest floor, uplooking SPN1 sensor
Rsw_global_spn1 Rsw.global.spn1 W/m^2 time Global short wave radiation at forest floor, uplooking SPN1
Rsw_in Rsw.in W/m^2 time Incoming short wave radiation at forest floor
Rsw_out Rsw.out W/m^2 time Reflected short wave radiation at forest floor
Rsum Rsum W/m^2 time Sum of 4 components of radiation at forest floor
Gsfc_a Gsfc.a W/m^2 time Surface heat flux at soil site "a"
Gsfc_b Gsfc.b W/m^2 time Surface heat flux at soil site "b"