OASIS98: Logbook Entries

OASIS98: SONICS Messages: 31 Entries..

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Entry Date Title Site Author #Graphics
192 Fri 07-Aug-1998NUW Sonic RemovalCathy Jirak
188 Wed 05-Aug-1998UW#2 downJohn Militzer
181 Sun 02-Aug-1998Zeroing of NUW1&2 SonicsCathy Jirak
173 Thu 30-Jul-1998NUW#1 ZeroedJohn Militzer
169 Wed 29-Jul-1998UW1 Rezeroing and problemsSteve Oncley
166 Tue 28-Jul-1998Reset NUW#1John Militzer
156 Fri 24-Jul-1998UW's flipped and rotatedSteve Oncley
148 Wed 22-Jul-1998uw sonic geometrySteve Oncley
138 Sun 19-Jul-1998nuw comparisonSteve Oncley
134 Sat 18-Jul-1998rezeroed uw2Steve Oncley
127 Thu 16-Jul-1998numw sonic booms adjusted slightlySteve Oncley
124 Wed 15-Jul-1998nuw1 fixedSteve Oncley
122 Wed 15-Jul-1998uw sonics up to 4.5mAllSteve Oncley
120 Wed 15-Jul-1998UW sonics zeroedSteve Oncley
118 Tue 14-Jul-1998ati.9m boom angle shotSteve Oncley
116 Tue 14-Jul-1998atm.9m remounted NCARSteve Oncley
114 Mon 13-Jul-1998second K-probe back at 1mNCARSteve Oncley
105 Thu 09-Jul-1998csat spatial averagingSteve Oncley1
104 Thu 09-Jul-19989m ATI taken downNCARSteve Oncley
95 Tue 07-Jul-1998wet towel on sonicNCARSteve Oncley
89 Tue 07-Jul-1998Sonic tilts calculated AllTom Horst
80 Fri 03-Jul-1998Deleted OKMN CSAT from covar.configOKMNTom Horst
78 Fri 03-Jul-1998Campbell sonic testsSteve Semmer
77 Thu 02-Jul-1998Campbell sonic going into marigoldSteve Semmer
69 Wed 01-Jul-1998Sonic elevation anglesAllTom Horst
65 Tue 30-Jun-1998Orientation of OKNM CSAT sonicOKMNTom Horst
53 Mon 29-Jun-1998Relevel work on both ATI sonicsSteve Semmer
50 Mon 29-Jun-1998Effect of sonic leveling errors on eddy fluxesTom Horst
49 Mon 29-Jun-1998Releveled NCAR 4.5m sonicTom Horst
21 Sun 21-Jun-1998Sonic boom azimuthsTom Horst
4 Mon 08-Jun-1998Sonic testingGordon Maclean


192: SONICS, Site , Fri 07-Aug-1998 17:19:52 CDT, NUW Sonic Removal
Both UW sonics have been removed from the tower and the tower is down.

Water was noticed in the space between the boom and the connector end. 

188: SONICS, Site , Wed 05-Aug-1998 16:44:39 CDT, UW#2 down
Wed. 5 Aug, ~11:00 UW#2 data stream died

At ~15:00 the UW2 apparently brought down the nc_server/ingest.
After reboot of system and a few power cycles of the UW2, serial
communications with the UW2 sonic continued to spit out
garbage.  Some portions of the message output was OK and the main
command menu would print out interspersed with garbage.
Removed sensor: water penetrated into the boom around the connector.
	No obvious water in and around the PC board or for that matter
	the connectors themselves.  Nevertheless, the whopping 1.8mm
	of rain this morning must've been too much for the UW.
	NOTE this UW was the one mounted upside down and it may have
	gotten water into the 2 mounting screws which normally would be
	on the bottom of the xarm.
	6:00 CDT   Rain, 1.8mm
	11:00	   UW sensor data going bad
	15:00	   UW hung up base ingest.
181: SONICS, Site , Sun 02-Aug-1998 17:00:26 CDT, Zeroing of NUW1&2 Sonics
After seeing the accuracy of NUW1 go south again. We decided to rezero. It was 
noticed that there was a diurnal pattern to the sample loss problem. After 
zeroing the NUW1 the sample rate stayed at 40 even after the signal began to go.
It was then decided to rezero NUW2. So far the sample rate is at 40 where it 
normally would have 36 or so.

Will watch to see how long this lasts.

	NUW2
U		T	Rh
	d=.201	37.9	21.87
	o= ???
V
	d=.20	37.89	21.78
	o=.028
W
	d=.199	37.95	22.02
	o=???

	NUW1
U	
	d=.201	38.1	21.89
	o=3.1
V
	d=.199	38.1	22.2
	o= ??
W
	d=.198	37.9	22.0
	o= .01

173: SONICS, Site , Thu 30-Jul-1998 09:54:00 CDT, NUW#1 Zeroed
Jul 30, 9:45 CDT

Zeroed UW#1
	This was done because this sensor has been reporting erroneous
	'U' data for several days beginning a day or two after being
	repositioned to point SE.  Power cycling hasn't helped.

	Conditions: T~= 31.4degC, RH~=39%
	Reported by Sonic:	Distance	Offset
		U, (a-axis)	0.199176	1.845867 (egads!)
		V, (b-axis)	0.199507	.001124
		W, (c-axis)	0.197715	not reported!

We'll keep an eye on it.  Suspect it won't make a big enough difference
to correct the problems being observed...
169: SONICS, Site , Wed 29-Jul-1998 16:21:58 CDT, UW1 Rezeroing and problems

ZEROING THE NUW SONICS: (Notes from Steve Oncley)
-------------------------------------------------
> > 
>   Did you have a zero chamber or do we need to make one?  Procedure
>   looks easy.  
>
Yes, there is a suitable chamber there.  In the wall cabinet above where the
Toshiba was sitting there should be at least 2 yellow "squishy" foam and
1 hard blue foam zero chambers on a middle shelf.  The long blue foam
chamber is what you want.  It opens with a magnetic catch and closes fairly
well over the path.

You will need to know the temperature and RH when you do the zero.  I
did the zeros with the sensor on the tower (accessed using the step ladder)
and rserial'ed to marigold 202(?) to grab current T/RH reading at 4.5m.  
You should be able to read the Xtemps and XRH displays as well.

The biggest problem is, as you may have noticed already, is that rserial
to the UWs gives you the prompt after you've entered the data.  I just
memorized the prompts:
C (to enter calibration mode)
Y (in response to: Are you sure?)
xx.x (for temperature)
yy.y (for rh, in percent)
U, V, or W (for the path: U=a, V=b, W=c.  HAVE THE CHAMBER ON THE APPROPRIATE
	PATH BEFORE HITTING RETURN.)
(wait for about 40 dots, then hit "Enter" a few times to restart)


As you've probably seen in the pages I inserted into the manual, path a
is the north-south path, path b has the top transducer to the east, and
path c you can figure out from there.  Tony drew this in pencil on the
top of the boom near the array.  

If you are going to zero one path, I would go ahead and zero all of them
(for the one sonic).

My guess is that zeroing isn't going to help.  Bringing it inside and running
it on the Toshiba may be necessary to figure out what is going on.


166: SONICS, Site , Tue 28-Jul-1998 15:30:03 CDT, Reset NUW#1
July 28, 15:35CDT
Power Cycle UW Sonic #1
Reason: For the last 1-2 days this sensor has been reporting erroneous
	speeds/vectors.  The UW's were reoriented on Friday July 24,
	before this one began acting up.  That began on ~ July 26, 7-CDT.

156: SONICS, Site , Fri 24-Jul-1998 12:03:42 CDT, UW's flipped and rotated
Jul 24, Friday, 
as of  10:00 this morning, I flipped and rotated the UWs.
nuw1 is upright and nuw2 is flipped.  We'll have to shoot boom angles.

After shooting the boom angles:
uw1 = 158.5547
uw2 = 202.9708

148: SONICS, Site , Wed 22-Jul-1998 12:12:23 CDT, uw sonic geometry
I've measured the geometry for both UW arrays.  However, I'm not terribly
confident in them since the paper disks moved a bit on the double-sided
tape and did not form a good reference surface.  Of course, I also was
eyeballing the centers.

These readings are mostly within 1mm of similar measurements, which would
imply an overall accuracy of 0.3 degrees.  I'll work up the actual angles
if I have time.

	uw1	uw2
ab/bb	87.00	86.87
bb/cb	86.74	86.82
cb/ab	87.01	86.78

at/bt	87.40	86.46
bt/ct	87.47	87.25
ct/at	87.03	86.41

ab/at	199.43	201.56
ab/bt	180.39	181.33
ab/ct	180.24	182.80

bb/at	180.48	183.13
bb/bt	200.60	201.46
bb/ct	181.31	182.81

cb/at	179.00	181.36
cb/bt	179.99	180.24
cb/ct	199.00	196.26

138: SONICS, Site , Sun 19-Jul-1998 15:49:30 CDT, nuw comparison
I've just started to look at the flow distortion from the parallel UW sonic
array.  The definitive comparison will have to wait until I have real
array geometries loaded.  (I need to obtain a calipers at least 8" long,
which I could either try to buy tomorrow, borrow from OU, or have John
bring out - after borrowing from our shop.)  Also, I should redo covars
with spike replacement.  Perhaps I'll even start that now.

In general the comparison is excellent (it should be for parallel!), except
for wind directions from the NE.  I assume that the wake of uw1 contaminates
uw2's measurements for this direction and causes uw2 to read somewhat lower
magnitudes, with more scatter.  This is consistent with the data.

I plan to change to a flipped and rotated configuration shortly before I
leave next week.

134: SONICS, Site , Sat 18-Jul-1998 19:13:34 CDT, rezeroed uw2
Because I thought I saw that the sonic #2 array was distorted through the
theodolite, we just check the pathlengths using the internal calibration.
They all worked out within 1mm of each other, so the array obviously is
okay.  (It doesn't look too bad up close.)  I still have to figure out
how to measure the geometry.

127: SONICS, Site , Thu 16-Jul-1998 09:43:09 CDT, numw sonic booms adjusted slightly
I moved both UW sonics about 2mm to the west between the brackets on the
S crossarm - in other words, less than 1 degree.  I also elevated them a
bit with foam rings, about 1mm thick when compressed.  This was done to 
prevent the arms from moving much.

I'll now shoot boom angles.

P.S. As noted in the status, these sonics were changed to report at 5 samp/s
to reduce the data load on ragwort.

P.P.S.  Boom angles are:
uw1: 001 deg 8' 00"
uw2: 001 deg 43' 18"

124: SONICS, Site , Wed 15-Jul-1998 17:35:06 CDT, nuw1 fixed
Based on several pieces of evidence (pathlengths of 18.7 cm after zeroing,
looking crooked, and having to pivot the mount last night), I realized that
the sonic array was damaged during shipping.  (I am guessing that this happened
on the way TO ATI, since their pathlengths also were 18.x.)  After taking it
down, one, and later two of the epoxy joints separated.  I reapplied epoxy
about 12:00 today and baked it in the car from 1:00 - 4:30.  I then
reassembled and mounted it, and have just rezeroed it.  The coefficients
are now:
		A		B		C
pathlength	0.198673	0.199728	0.198278
offset		-0.047704	-0.028221	0.018013

The offsets are a bit larger than I would have liked, but the pathlengths
now look pretty good (though still not as close to 0.200 as nuw2).

FINALLY, we are now starting the parallel part of the flipped and rotated
tests on the UWs!!

Note: We still need to shoot boom angles.

122: SONICS, Site All, Wed 15-Jul-1998 11:10:23 CDT, uw sonics up to 4.5m
The UW sonics have been moved up to 4.5m in the nominally parallel 
configuration.  (I had wondered why the data didn't agree better between the
UW and ATIs and then realized that the UWs had been at 1m.)  Unfortunately,
it appears from a distance that the UW1 (actually UW3) array is bent!
This also would explain why the zero calibrations found that the paths were
18.8, rather than 20 cm.  I noticed that the array had been skewed during
shipping, but it may have suffered even more.

I'm going back now to bring it down and try realigning it in the jig.

120: SONICS, Site , Wed 15-Jul-1998 09:08:02 CDT, UW sonics zeroed
Both UW sonics were just calibrated.

nuw1 (east): [SUW3]
		A		B		C
pathlength	0.187446	0.188175	0.189011
offset		-0.011071	-0.009161	-0.000487

nuw2 (west): [SUW4]

pathlength	0.199335	0.199497	0.199539
offset		-0.013521	0.015395	-0.006920

All the offsets look good to me, and the pathlengths for nuw2 are great.
I don't know why the pathlengths for nuw1 are short, but I'll ignore it
for now.

Now I get to figure out what is wrong with the calibration routine.

118: SONICS, Site , Tue 14-Jul-1998 11:55:04 CDT, ati.9m boom angle shot
Tony and I just shot the boom angle for the 9m ATI with the theodolite.
His reading was: 3 degrees 16' 40"
My reading was: 3 degrees 14' 08"

I think both readings were about of equal weight, so I would average these
to 3 degrees 15'.

This was shooting the back "U" transducer through the arm supporting the
front "U" transducer (and probably the top "W").  I noticed that the
4.5m ATI was facing more easterly, i.e. an angle more like 1 degree?

116: SONICS, Site NCAR, Tue 14-Jul-1998 09:11:46 CDT, atm.9m remounted
We've RTV'd the ati K-probe back together.  I also did a laboratory (trailer)
zero calibration on all 3 paths.  It found biases of about 1 cm/s and path-
lengths of about 14.6 cm for all paths.  

The boom is drooping a bit, just due to the weight.  I've done as much as
I can with the yoke - there is a bit of play in the square part of the yoke.
We could try shimming.  For the moment, I've just left the droop in, assuming
that it can be removed later by tilt.sonic.

We still need to shoot the new boom angle.  I wouldn't expect it to have
changed much.

114: SONICS, Site NCAR, Mon 13-Jul-1998 15:49:15 CDT, second K-probe back at 1m
We installed the replacement U2 transducer in the ati K-probe and have
had it running at 1m on the UW tower for about an hour.  We'll continue
to run it for a while to decide if it is working well enough to mount at 9m.

When we do, we will have to:
1. zero it
2. feed a bit more cable up the tower
3. shoot the boom angle.

105: SONICS, Site , Thu 09-Jul-1998 17:29:44 CDT, csat spatial averaging
Tom has e-mailed me the response for spatial averaging for one path from
Kaimal's 1968 paper, and I have the data for my model of the spatial averaging
for the UW.  I have added a plot of these to this entry.  Generally, the
response with 3 paths at 60 degrees from a sonic with a 10 cm path (the 
CSAT) to W is about the same as a single vertical path with a 15 cm pathlength.

Thus, spatial averaging does not explain the differences we are seeing between
statistics from the CSAT and ATI.


104: SONICS, Site NCAR, Thu 09-Jul-1998 12:05:16 CDT, 9m ATI taken down
To allow us to check why the 9m ATI is spiking on U, I've climbed the tower
and taken the sonic head down.  (The Krypton is still mounted to the boom
at 9m).  Note that I had to disconnect the yoke in order to give the cables
enough play to allow me to pull the head out of the boom, so TILT CORRECTIONS
WILL NEED TO BREAK THE FIT AT THIS TIME.

The head is now reconnected and running on channel 201, but is physically
at 1m on the UW test tower (which has no other sonic running on it yet).
Already the U channel appears to be spiking, so this is a good test 
configuration.

We're going to lunch now.  Assuming that it is still bad after lunch, I'll
try looking at the signals on the scope.

----------------------------------
5:30 PM
It appears that the u signal is weak, I think going from u2 -> u1 (the
4th of 6 transmissions).  I'm going to try to get another transducer sent
here as a replacement.  Note that this sonic has been off and on all
day as I fiddled with it - all at 1m on the UW tower.  I've taken it off
completely for the night, since it is not weather tight.  I'll put it 
back up to 9m tomorrow.

95: SONICS, Site NCAR, Tue 07-Jul-1998 14:14:13 CDT, wet towel on sonic
In an attempt to figure out why the 9m ati is spiking, I wrapped the boom
with a wet towel about 1400 CDT.  (We hoped that the electronics would be
cooled.)  This did not affect the spiking, but probably disturbed the
krypton humidity measurement.  I'll remove it in another 15 min. or so.

Towel was removed about 15:05.  It was still damp.  I also used a finger 
to wipe a bit of dust off of both U transducers.  I doubt that any of this
made any difference.

89: SONICS, Site All, Tue 07-Jul-1998 08:34:02 CDT, Sonic tilts calculated
Steve calculated the sonic tilt angles yesterday, using fun.sonic.tilt.dat.
We used three days of data beginning June 29 16:30 CDT.

Sonic	offset	pitch	roll	b1	b2	b3	lean	phase
	cm/s	deg	deg				deg	deg
---------------------------------------------------------------------
ATIK
4.5m	-1	0.4	0.1	-0.012	0.006	-0.001	0.36	170
CSAT
4.5m	3	0.4	0.2	0.029	0.008	-0.003	0.49	157
ATIK
9m	-1	-0.4	0.6	-0.015	-0.008	-0.010	0.73	54

These fits included two groups of data, one for wind from the east and
a second for wind from the south.

We applied this to two sets of data and found that the changes in u*
and  were on the order of 1-2% and that the differences between
the two 4.5m sonics were less than ~1%.



80: SONICS, Site OKMN, Fri 03-Jul-1998 11:07:38 CDT, Deleted OKMN CSAT from covar.config
I had been covaring the CSAT data to compare it to the statistics
calculated by OKMN.  These statistics were identical with the exception
of a small offset in tc (tc' statistics were identical), likely caused
by some small difference in the computation of tc from the speed of sound.

Now I have deleted the csat from the covar file again in order to avoid
needlessly duplicating these statistics in the NetCDF file.
78: SONICS, Site , Fri 03-Jul-1998 09:27:27 CDT, Campbell sonic tests
  From 8:30 to 10:00 (local), the Campbell sonic
was running in an unprompted mode with sync characters.
This was a test to see if ASTER would handle this mode
and to see if it effected the SDM communication to the
OK logger.
  This mode of operation had no effect on SDM.

Refer to document in $ASTER/projects/OASIS98/doc for more
information on how to add the sync characters to the sonic
output message.


77: SONICS, Site , Thu 02-Jul-1998 14:30:48 CDT, Campbell sonic going into marigold
  The Campbell sonic is being sampled on channel 206
of marigold. Changes were made to prep.config, channel_config,
and covar.config.
  The sonic is operating in a prompted mode; ie, marigold
is sending a "W" to the instrument to get data. The data are
also being sampled by OU via the SDM communication. At this time
we do not know if we are causing any problems.

69: SONICS, Site All, Wed 01-Jul-1998 08:50:56 CDT, Sonic elevation angles
Calculated elevation angles of the wind for the period 
June 29, 16:35 CDT to July 1 8:35 CDT.  During this period
u ranged from -4 to +8 m/s and v from -5 to +6 m/s.

sonic		atan(w/u)	atan(w/v)

4.5m NCAR	 0.4 deg	-0.2 deg
4.5m OKMN	 0.7 deg	-0.5 deg
9m NCAR		-0.3 deg	-0.3 deg

Mean offsets in w were on the order of a few cm/s

65: SONICS, Site OKMN, Tue 30-Jun-1998 16:00:17 CDT, Orientation of OKNM CSAT sonic
Steve shot the orientation of the OKMN CSAT sonic:

nominal N/S path 	357d 07m 50s
nominal SW/NE path 	057d 45m 55s
nominal SE/NW path	296d 43m 55s


53: SONICS, Site , Mon 29-Jun-1998 17:19:46 CDT, Relevel work on both ATI sonics
  From 14:00 to 16:30 (local) I was playing with the
levels of the ATI. I started with the 9m. This required
adjustmments on the chain links and turnbuckles on the
south guywires. Once this was completed, the 4.5m was
adjusted using some panduit ties, a radiator clamp, and
some choice words! I talked to ATI about the calibration
function for the sensors. It is different from the old
units. Therefore the calibration routine for the sonics
will need to be modified.
  The new transfer function is:
	degrees = counts * 1.5/1024
According to ATI the sensor range is +-4 degrees over a
range of +-2048. However it is not that linear over the
full range. They recommended using the smaller range.
At this time, we are not sure their function is correct.
Tom is doing some number crunching to try to confirm this.

50: SONICS, Site , Mon 29-Jun-1998 10:50:28 CDT, Effect of sonic leveling errors on eddy fluxes
Let 'a' be the angle of the u axis above horizontal.  Then

u_r = u*cos(a) + w*sin(a)
w_r = -u*sin(a) + w*cos(a)

uw_r = (ww-uu)*sin(a)*cos(a) + uw*(cos(a)^2 - sin(a)^2)

(u*_r)^2 = (u*)^2*[1 + (uu-ww)/(u*)^2*sin(a)],   cos(a) ~ 1, sin(a)^2 ~ 0

From data, (uu-ww)/(u*)^2  has a value around +5, so a = 1 deg gives an
error in u* of about 4%.  Assuming w = 0, a = atan(-w_r/u_r) give an angle 
of 1.64 deg for the ATI sonic and an error in u* of about 7%.  For the
CSAT sonic, a = -0.63 deg, for a u* error of -3% and thus 

(u*_r).ATI = 1.1*(u*_r).CSAT

The data show (u*_r).ATI = 1.14*(u*_r).CSAT

wtc_r = -utc*sin(a) + wtc*cos(a)

wtc_r = wtc*[1 - utc/wtc*sin(a)]

From data, utc/wtc has a value around -2, so a = 1 deg give an error
in w'tc' of about 3.5%.  Thus the error in w'tc' for the ATI is about  
6% and the error for the CSAT is about 2%, so that

wtc_r.ATI = 1.08*wtc_r.CSAT

the data show wtc_r.ATI = 1.13*wtc_r.CSAT

49: SONICS, Site , Mon 29-Jun-1998 10:26:46 CDT, Releveled NCAR 4.5m sonic
Plots of w versus u and v give the following for the three sonics:

		atan(w/u)  w (m/s)	atan(w/v)  w (m/s)
ATI 4.5m	-1.64 deg  0.03		-0.70 deg  -0.09
ATI 9m		-1.29 deg  0.02		-0.15 deg   0.08
CSAT 4.5m	 0.63 deg  0.04		-0.04 deg  -0.08

We releveled the NCAR 4.5m sonic between 9:30 and 11:00 this morning, 
using a bubble level.  The u axis is level, but the v axis is still 
high to the west.

Steve checked the u axis with the theodolite, looking east along the
boom, and it looks good.

I looked at the bubble on the OKMN CSAT and it is right on center.

21: SONICS, Site , Sun 21-Jun-1998 12:47:07 CDT, Sonic boom azimuths
Steve shot sonic boom azimuths with theodolite

4.5m sonic	2d 00m 20s
9m sonic	3d 38m 00s


4: SONICS, Site , Mon 08-Jun-1998 09:50:36 EDT, Sonic testing
ATI sonic, S/N 980504, as ragwort channel 201 has showed a few spikes
(1 or 2 per hour) on V during testing in the staging area. Other
components were clean.

Serial #980505 as ragwort 200 showed no spikes.

They were configured with a 5ms sampling interval, 10
samples/average, giving 20hz output, 9600 baud, with 2 levels and
nsamples also output.

The sonics were next to each other, extended from a benchtop, with
the V arm of #980505 (which didn't spike) about 3 inches from a
wall.


Binary mode:
In an effort to lower the serial overhead I tried to configure the
sonics in binary mode.  It mostly worked.  U,V,W,Tc looked OK, but
the levels (which were one byte each) were always 0.  There did not
seem to be a way to get nsamples output in binary mode.